PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.F00019.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family B3
Protein Properties Length: 302aa    MW: 34142.4 Da    PI: 4.8107
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.F00019.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.71.6e-16119220199
                       EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS. CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr. 87 
                       f+k+l++sdv++++r+vlpk+ ae h   ++++e++ +++ d +g   W +k++y  +++s++yvl+  + eFv  +gL++ D ++ +  ++ 
  Migut.F00019.1.p 119 FKKQLKNSDVSALRRMVLPKRDAEIHlpVLESKEGVYISMLDMDGlHDWWFKYRYwpNNSSRMYVLE-STGEFVYTHGLETDDYILVY--QNv 208
                       89*********************999**55666899********999********888999999999.9***************9999..677 PP

                       SEE..EEEEE-S CS
                B3  88 sefelvvkvfrk 99 
                       +++++v+ +++k
  Migut.F00019.1.p 209 EDGKYVIEARKK 220
                       9**999999887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.108.7E-23112223IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019363.92E-18116221IPR015300DNA-binding pseudobarrel domain
CDDcd100173.89E-20118219No hitNo description
SMARTSM010194.4E-14119221IPR003340B3 DNA binding domain
PROSITE profilePS508638.854119221IPR003340B3 DNA binding domain
PfamPF023621.1E-12119220IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0008284Biological Processpositive regulation of cell proliferation
GO:0009733Biological Processresponse to auxin
GO:0010116Biological Processpositive regulation of abscisic acid biosynthetic process
GO:0010262Biological Processsomatic embryogenesis
GO:0010373Biological Processnegative regulation of gibberellin biosynthetic process
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MERNEAISYS NGEEVKVVMG SSSNSNSNSI AEGVRRRSSS RLQQNRNVEE PAELGVQRPD  60
FFSTPGFVNI HRGPRMPRSR RATPLSLTFP ASHVPPPPPP PPPAAAAREI DLSKLNYLFK  120
KQLKNSDVSA LRRMVLPKRD AEIHLPVLES KEGVYISMLD MDGLHDWWFK YRYWPNNSSR  180
MYVLESTGEF VYTHGLETDD YILVYQNVED GKYVIEARKK EEQDAPRILL NEVVIREPTA  240
TDMALSLIDE GMEALYEYNA TFMDDTPLDY LGGPITLPSL GINSSTYEAI DNFNYNNAPD  300
F*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00382DAPTransfer from AT3G26790Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011098957.11e-102PREDICTED: B3 domain-containing transcription factor FUS3-like isoform X1
SwissprotQ9LW312e-54FUS3_ARATH; B3 domain-containing transcription factor FUS3
TrEMBLA0A022QSZ80.0A0A022QSZ8_ERYGU; Uncharacterized protein (Fragment)
STRINGGLYMA16G05480.23e-61(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA80452125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.13e-51B3 family protein